Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gliding motility lipoprotein gldj | D7004_00040 | Not Available | - | 6660 - 8318 | 61143.4 |
| hypothetical protein | D7004_00045 | Not Available | + | 8994 - 10181 | 42454.1 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | D7004_00050 | Not Available | + | 10238 - 10717 | 17341.1 |
| glycosyltransferase | D7004_00055 | Not Available | - | 10766 - 14170 | 128285.0 |
| pirin family protein | D7004_00060 | Not Available | - | 14527 - 15396 | 32285.2 |
| polyisoprenoid-binding protein | D7004_00065 | Not Available | - | 15451 - 15981 | 19160.3 |
| crp/fnr family transcriptional regulator | D7004_00070 | Not Available | - | 16256 - 16843 | 22846.7 |
| feob-associated cys-rich membrane protein | D7004_00075 | Not Available | - | 16854 - 17012 | 5765.32 |
| hypothetical protein | D7004_00080 | Not Available | - | 17330 - 18517 | 45845.1 |
| gmp synthase | D7004_00085 | Not Available | - | 18601 - 19428 | 31256.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.