Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf11 domain-containing protein | D7004_00005 | Not Available | + | 1 - 1465 | 51431.7 |
| 5s ribosomal rna | Not Available | Not Available | + | 124 - 235 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 375 - 3253 | Not Available |
| deda family protein | D7004_00010 | Not Available | + | 1981 - 2637 | 24736.6 |
| inorganic diphosphatase | D7004_00015 | Not Available | + | 2640 - 3191 | 20818.1 |
| hlyc/corc family transporter | D7004_00020 | Not Available | + | 3293 - 4615 | 49270.5 |
| 16s ribosomal rna | Not Available | Not Available | + | 4192 - 5709 | Not Available |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | D7004_00025 | Not Available | + | 4624 - 5340 | 27433.2 |
| duf4159 domain-containing protein | D7004_00030 | Not Available | + | 5327 - 6052 | 27882.8 |
| biotin/lipoyl-binding protein | D7004_00035 | Not Available | + | 6055 - 6555 | 18403.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.