Segatella copri CAG:164

Gram-negativeAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Segatella

Description

Segatella copri CAG:164 is a Gram-negative, anaerobic bacterium characterized by its inability to thrive in the presence of oxygen. As an anaerobe, it relies on fermentation or anaerobic respiration for its metabolic processes, which is a significant aspect of its ecological niche. The Gram-negative classification indicates that the bacterium possesses a thin peptidoglycan layer surrounded by an outer membrane, a feature that can influence its susceptibility to certain antibiotics and its interactions with host organisms. While the specific ecological roles and interactions of Segatella copri CAG:164 remain to be fully elucidated, its anaerobic nature suggests it may inhabit environments with low oxygen availability, such as the human gut or other anaerobic ecosystems. The presence of such bacteria in these niches is crucial for various biological processes, including fermentation, nutrient cycling, and maintaining the overall health of the microbiome. This organism's adaptation to anaerobic conditions may also play a role in its potential contributions to metabolic processes that influence host physiology, such as the production of short-chain fatty acids, which are important for gut health. Further research is needed to better understand the specific functions and interactions of Segatella copri CAG:164 within its ecological context.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusSegatella
SpeciesSegatella copri
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Segatella copri CAG:164

Accession NumberCBCH000000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2331 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
uncharacterized proteinBN510_00001Not Available+156 - 3989102.13
putative uncharacterized proteinBN510_00584Not Available+1679 - 235925279.0
atpaseBN510_00585Not Available+2578 - 379246759.5
nitroreductase family proteinBN510_00586Not Available+3814 - 420014641.8
putative uncharacterized proteinBN510_00587Not Available-4268 - 475618684.3
uncharacterized proteinBN510_00588Not Available-4743 - 605050016.5
putative dna mismatch repair protein mutsBN510_00589Not Available+6255 - 819873232.3
transcription elongation factor grea 2BN510_00590Not Available-8269 - 873317165.9
putative uncharacterized proteinBN510_00591Not Available-8890 - 1002042687.2
leucine responsive regulatory proteinBN510_00592Not Available+10244 - 1072018342.1

Displaying genes 1 – 10 of 2385 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

83 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0002780orotidine 5'-phosphateC10H10N2O11PNot available2149-82-8
Average365.168Da
Monoisotopic365.003866888Da
BASm0003987cob(I)alaminC62H88CoN13O14PChemical structure of cob(I)alamin18534-66-2
Average1329.3478Da
Monoisotopic1328.564331Da
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014035Glycolic acidC2H4O3Chemical structure of Glycolic acid79-14-1
Average76.0514Da
Monoisotopic76.016043994Da
BASm0014036Glyoxylic acidC2H2O3Chemical structure of Glyoxylic acid298-12-4
Average74.0355Da
Monoisotopic74.00039393Da
BASm0014037Fumaric acidC4H4O4Chemical structure of Fumaric acid110-17-8
Average116.0722Da
Monoisotopic116.010958616Da

Displaying 1–10 of 83 metabolites