Campylobacter showae CSUNSWCD

Gram-negativeAerobe

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Campylobacteraceae

Genus

Campylobacter

Description

Campylobacter showae CSUNSWCD is a gram-negative, spiral-shaped bacterium that thrives within a temperature range of 37°C and is classified as a microaerophile. This microbe is a chemoheterotroph, meaning it relies on organic compounds for growth and energy. C. showae is primarily found in the gastrointestinal tracts of various animals, particularly birds, and occasionally in mammals, contributing to the rich biodiversity of gut microbiota. The gram-negative nature of C. showae is indicative of its cell wall composition, which consists of a thin peptidoglycan layer sandwiched between two membranes. This structural arrangement not only provides resilience against environmental stresses but also influences the bacterium's pathogenic potential. Its spiral shape contributes to its motility, allowing it to efficiently navigate through viscous environments, such as mucus lining the gut. As a microaerophile, C. showae exhibits a unique oxygen dependency; it thrives in environments with reduced oxygen levels, which is typical of the intestinal microbiome. Its chemoheterotrophic lifestyle enables it to derive energy from organic substrates, particularly amino acids and fatty acids, enhancing its adaptability to various ecological niches. Notably, C. showae has been studied for its role in gastrointestinal diseases. It has been associated with various enteric infections in humans and animals, leading to gastroenteritis characterized by diarrhea and abdominal cramping. Beyond its pathogenic potential, this microbe contributes to the understanding of microbial interactions within the gut and the broader implications for health and disease. Its presence serves as an indicator of fecal contamination in environmental samples, making C. showae an essential organism in environmental microbiology and public health monitoring.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyCampylobacteraceae
GenusCampylobacter
SpeciesCampylobacter showae
StrainCSUNSWCD

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Campylobacter showae CSUNSWCD
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Campylobacter showae CSUNSWCD


Gene Summary

Adenine Count

591639 bp

Thymine Count

574449 bp

Guanine Count

487304 bp

Cytosine Count

471781 bp

Genome Length

2125173 bp

Protein-coding Genes

2443 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+1443815 - 1443833Not Available
IntegraseCSUNSWCD_2440Not Available+1446244 - 144836478659.1
Transposase bCSUNSWCD_2441Not Available+1448486 - 144936432556.6
hypothetical proteinCSUNSWCD_2442Not Available+1449361 - 14496069498.58
hypothetical proteinCSUNSWCD_2443Not Available+1449671 - 145004213928.9
hypothetical proteinCSUNSWCD_2444Not Available+1450156 - 14503657566.32
Host-nuclease inhibitor gam family proteinCSUNSWCD_2445Not Available+1450356 - 145084418570.5
Hypothetical proteinCSUNSWCD_2446Not Available+1450927 - 145131014852.0
hypothetical proteinCSUNSWCD_2447Not Available+1451303 - 145176117376.1
C-5 cytosine-specific dna methylaseCSUNSWCD_2448Not Available+1451758 - 145289142230.0

Displaying genes 1 – 10 of 2525 in total

Metabolites

364 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da

Displaying 1–10 of 364 metabolites