Campylobacter fetus subsp. fetus 04/554

Gram-negativeSpirillaMotileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Campylobacteraceae

Genus

Campylobacter

Description

Campylobacter fetus subsp. fetus 04/554 is a Gram-negative bacterium characterized by its spirilla shape and tendency to form chains or exist as singles. This microbe is microaerophilic, indicating that it requires reduced levels of oxygen for optimal growth, a trait that is typical for many members of the Campylobacter genus. C. fetus subsp. fetus 04/554 is host-associated, suggesting a close relationship with a specific host organism, which may influence its ecological niche and interactions within the host environment. The microaerophilic nature of C. fetus subsp. fetus 04/554 implies that it may thrive in environments where oxygen levels are lower than atmospheric concentrations, such as the intestinal tracts of certain animals. Its spirilla shape and unique cell arrangement could play a role in its motility and colonization capabilities within the host. Understanding the habitat preferences and growth requirements of this strain can contribute to a broader comprehension of its ecological role and potential interactions with the host microbiome. In conclusion, the specific traits of C. fetus subsp. fetus 04/554 suggest that it may occupy a specialized ecological niche within its host, possibly influencing host physiology and microbiota dynamics in a manner that reflects the adaptive strategies of microaerophilic organisms.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyCampylobacteraceae
GenusCampylobacter
SpeciesCampylobacter fetus
Strainsubsp. fetus 04/554

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Campylobacter fetus subsp. fetus 04/554
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementChains - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Campylobacter fetus subsp. fetus 04/554


Gene Summary

Adenine Count

608856 bp

Thymine Count

593915 bp

Guanine Count

301786 bp

Cytosine Count

296207 bp

Genome Length

1800764 bp

Protein-coding Genes

1806 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+1106227 - 1106238Not Available
Capsid protein gpeCFF04554_RS05620Not Available-1117242 - 111817734543.1
PeptidaseCFF04554_RS05625Not Available-1118177 - 111891427086.2
Phage portal proteinCFF04554_RS05630Not Available+1119046 - 112010739952.4
Terminase large subunitCFF04554_RS05635Not Available+1120210 - 112178159496.6
Tail componentCFF04554_RS09360Not Available+1121778 - 112218815021.6
hypothetical proteinCFF04554_RS05645Not Available-1122181 - 11223847583.35
Antirepressor proteinCFF04554_RS09365Not Available-1122381 - 112301924413.2
hypothetical proteinCFF04554_RS05655Not Available-1123416 - 11236408399.05
hypothetical proteinCFF04554_RS05660Not Available-1123727 - 112401711223.1

Displaying genes 1 – 10 of 1905 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

250 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001360methanesulfonateCH3O3SChemical structure of methanesulfonate59721-29-8
Average95.09Da
Monoisotopic94.980838711Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da

Displaying 1–10 of 250 metabolites