Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum californiense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Halorubrum californiense DSM 19288
Accession NumberAOJK00000000.1
Gene Summary
Adenine Count
622251 bp
Thymine Count
622914 bp
Guanine Count
1214678 bp
Cytosine Count
1222823 bp
Genome Length
3682872 bp
Protein-coding Genes
3456 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair protein muts | C463_12862 | Not Available | + | 2680058 - 2682829 | 99547.0 |
| hypothetical protein | C463_12867 | Not Available | + | 2682899 - 2683249 | 12692.7 |
| nad-dependent epimerase/dehydratase | C463_12872 | Not Available | + | 2683371 - 2684270 | 33081.7 |
| hypothetical protein | C463_12877 | Not Available | - | 2684304 - 2684990 | 23828.2 |
| hypothetical protein | C463_12882 | Not Available | - | 2685068 - 2685253 | 6245.53 |
| trka-n domain protein | C463_12887 | Not Available | + | 2685809 - 2687644 | 64381.1 |
| Trna-pseudo | Not Available | Not Available | + | 2687895 - 2687967 | Not Available |
| replication factor a | C463_12892 | Not Available | + | 2688215 - 2689708 | 53009.6 |
| transcription factor cbf/nf-y/histone domain protein | C463_12897 | Not Available | + | 2689797 - 2690228 | 15577.3 |
| histone deacetylase superfamily protein | C463_12902 | Not Available | + | 2690229 - 2691233 | 35943.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.