Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassobacter |
| Species | Thalassobacter sp. 16PALIMAR09 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thalassobacter sp. 16PALIMAR09
Accession NumberJHAK00000000.1
Gene Summary
Adenine Count
712909 bp
Thymine Count
740935 bp
Guanine Count
1065415 bp
Cytosine Count
1012609 bp
Genome Length
3531868 bp
Protein-coding Genes
3298 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PM04_00110 | Not Available | - | 20011 - 20199 | 6884.11 |
| asnc family transcriptional regulator | PM04_00115 | Not Available | - | 20239 - 20895 | 24443.3 |
| abc transporter substrate-binding protein | PM04_00120 | Not Available | + | 21033 - 22013 | 35140.6 |
| c4-dicarboxylate abc transporter substrate-binding protein | PM04_00125 | Not Available | + | 22091 - 22636 | 20277.2 |
| c4-dicarboxylate abc transporter | PM04_00130 | Not Available | + | 22639 - 23955 | 46786.5 |
| decarboxylase | PM04_00135 | Not Available | + | 23952 - 25199 | 45130.9 |
| malonyl-coa synthase | PM04_00140 | Not Available | + | 25209 - 26729 | 54239.6 |
| pyridoxamine 5'-phosphate oxidase | PM04_00145 | Not Available | - | 26726 - 27244 | 18521.9 |
| ornithine cyclodeaminase | PM04_00150 | Not Available | - | 27241 - 28158 | 31929.2 |
| aminotransferase | PM04_00155 | Not Available | - | 28155 - 29300 | 41862.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.