Aeromonas media WS

Gram-negativerodFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Aeromonadales

Family

Aeromonadaceae

Genus

Aeromonas

Description

Aeromonas media WS is a Gram-negative, rod-shaped bacterium that thrives at mesophilic temperatures, primarily categorized as a facultative anaerobe and exhibiting chemotrophic metabolism. This microbe plays a significant role in aquatic environments, often found in freshwater habitats, including rivers and lakes, as well as in the gastrointestinal tract of various animals. The Gram-negative nature of Aeromonas media WS indicates the presence of a thin peptidoglycan layer surrounded by an outer membrane that contains lipopolysaccharides, which can contribute to its pathogenicity and resistance to certain antibiotics. Being rod-shaped allows it to exhibit motility through flagella, facilitating its movement within diverse aquatic ecosystems and enhancing its ability to colonize hosts. As a mesophilic organism, it optimally grows at moderate temperatures, generally between 20°C and 37°C, allowing it to thrive in temperate environments. As a facultative anaerobe, Aeromonas media WS has the metabolic flexibility to utilize both aerobic respiration and fermentation pathways, enabling it to survive in fluctuating oxygen levels. This versatility is crucial for its survival in various habitats, including low-oxygen niches. The chemotrophic metabolism allows it to derive energy from organic compounds present in the environment, contributing to its role in nutrient cycling. Aeromonas media WS has been implicated in waterborne diseases, particularly gastroenteritis in humans and aquatic animals, showcasing its potential as a pathogen in certain contexts. Additionally, it is of interest in bioremediation studies due to its ability to degrade pollutants in aquatic ecosystems, highlighting its ecological importance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAeromonadales
FamilyAeromonadaceae
GenusAeromonas
SpeciesAeromonas media
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceorganotroph; chemotroph
PathogenicityNot Available

Genome Summary

Aeromonas media WS


Gene Summary

Adenine Count

938500 bp

Thymine Count

937083 bp

Guanine Count

1444232 bp

Cytosine Count

1457339 bp

Genome Length

4777154 bp

Protein-coding Genes

4219 genes

Non-Coding Genes

238 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Hypothetical proteinB224_RS06085Not Available-1320167 - 132051112727.3
hypothetical proteinB224_RS22105Not Available-1320646 - 132123020803.0
Repressor protein ciB224_RS06090Not Available-1321435 - 132208524390.9
Prophage anti-repressorB224_RS21785Not Available+1322173 - 13223496265.78
Regulatory cii-like proteinB224_RS06095Not Available+1322346 - 132286718941.6
hypothetical proteinB224_RS06100Not Available+1322945 - 13231577783.64
Replication protein oB224_RS21790Not Available+1323150 - 132407034017.6
Putative replication protein pB224_RS06110Not Available+1324070 - 132473824920.9
hypothetical proteinB224_RS06115Not Available+1324725 - 132509313507.3
hypothetical proteinB224_RS06120Not Available+1325099 - 132537410300.5

Displaying genes 11 – 20 of 4469 in total

Metabolites

298 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0002026acrylateC3H3O2Chemical structure of acrylate10344-93-1
Average71.056Da
Monoisotopic71.013852917Da
BASm00022412-demethylmenaquinone-8C50H70O2Chemical structure of 2-demethylmenaquinone-8Not available
Average703.0896Da
Monoisotopic702.5375815Da

Displaying 1–10 of 298 metabolites