Pseudomonas fluorescens ICMP 11288

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fluorescens ICMP 11288 is a Gram-negative, rod-shaped bacterium that typically exists as single cells. This strain is classified as a heterotroph, deriving its energy from organic compounds in its environment. P. fluorescens ICMP 11288 thrives optimally at a temperature of 25.0°C, indicating its adaptability to moderate environmental conditions. As an aerobe, this bacterium requires oxygen for its metabolic processes, positioning it within ecosystems where oxygen is readily available. The habitat of Pseudomonas fluorescens ICMP 11288 is diverse, suggesting a broad ecological niche. This adaptability may confer advantages in various environments, potentially facilitating its role in nutrient cycling and organic matter degradation. The presence of P. fluorescens in multiple habitats emphasizes its ecological versatility and underscores the importance of studying its metabolic capabilities, which can have implications for bioremediation and agricultural applications. Understanding the specific conditions that favor the growth and metabolic functions of this strain could provide insights into its ecological interactions and contributions to microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas fluorescens
StrainICMP 11288

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas fluorescens ICMP 11288
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas fluorescens ICMP 11288


Gene Summary

Adenine Count

1282366 bp

Thymine Count

1314248 bp

Guanine Count

1988752 bp

Cytosine Count

1937688 bp

Genome Length

6523157 bp

Protein-coding Genes

5664 genes

Non-Coding Genes

129 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+924087 - 924151Not Available
IntegraseAO063_20950Not Available-924245 - 92538143404.2
hypothetical proteinAO063_20955Not Available-925381 - 9256148495.67
Hypothetical proteinAO063_20960Not Available-925653 - 92612316659.0
hypothetical proteinAO063_20965Not Available-926197 - 9263796956.28
Hypothetical proteinAO063_20970Not Available-926429 - 92675212140.0
hypothetical proteinAO063_20975Not Available-926847 - 92715211068.2
EndolysinAO063_20980Not Available-927149 - 92743610337.3
hypothetical proteinAO063_20985Not Available+927729 - 9279809386.28
hnh endonucleaseAO063_20990Not Available-928030 - 92913040089.3

Displaying genes 1 – 10 of 5793 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

360 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da

Displaying 1–10 of 360 metabolites