Flammeovirga sp. MY04

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Flammeovirgaceae

Genus

Flammeovirga

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyFlammeovirgaceae
GenusFlammeovirga
SpeciesFlammeovirga sp. MY04
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flammeovirga sp. MY04

Accession NumberNZ_CP003562.2

Gene Summary

Adenine Count

28175 bp

Thymine Count

28911 bp

Guanine Count

11789 bp

Cytosine Count

14038 bp

Genome Length

82913 bp

Protein-coding Genes

71 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
rip metalloprotease rsepMY04_RS17075Not Available-4305330 - 430667950984.3
1-deoxy-d-xylulose-5-phosphate reductoisomeraseMY04_RS17080Not Available-4306721 - 430787842377.0
hypothetical proteinMY04_RS17085Not Available+4308063 - 430834410702.0
glycine cleavage system protein gcvhMY04_RS17090Not Available+4308497 - 430887713852.1
nudix hydrolaseMY04_RS17095Not Available+4309081 - 430970123940.3
wg repeat-containing proteinMY04_RS17100Not Available+4309702 - 431193985899.3
hypothetical proteinMY04_RS17105Not Available+4312060 - 43122456926.58
chase2 domain-containing proteinMY04_RS17110Not Available+4312412 - 431362946869.8
hypothetical proteinMY04_RS17115Not Available+4313725 - 431460632875.1
tvp38/tmem64 family proteinMY04_RS17120Not Available-4314664 - 431537126241.7

Displaying genes 4971 – 4980 of 5621 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

19 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000841L-arabinono-1,4-lactoneC5H8O5Chemical structure of L-arabinono-1,4-lactoneNot available
Average148.114Da
Monoisotopic148.037173358Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0001845nicotinateC6H4NO2Chemical structure of nicotinateNot available
Average122.1015Da
Monoisotopic122.0242034Da
BASm0001864Cr(6+)CrChemical structure of Cr(6+)Not available
Average51.9961Da
Monoisotopic51.9405119Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002002glyoxylateC2HO3Chemical structure of glyoxylateNot available
Average73.0275Da
Monoisotopic72.9925689Da
BASm0002147N-ethylsuccinimideC6H9NO2Chemical structure of N-ethylsuccinimide2314-78-5
Average127.1412Da
Monoisotopic127.0633285Da
BASm0002198beta-D-ribofuranoseC5H10O5Chemical structure of beta-D-ribofuranose50-69-1
Average150.1299Da
Monoisotopic150.05282343Da
BASm00025382-(5-oxo-2,5-dihydrofuran-2-ylidene)acetateC6H3O4Chemical structure of 2-(5-oxo-2,5-dihydrofuran-2-ylidene)acetateNot available
Average139.087Da
Monoisotopic139.0036822Da
BASm0002963meso-2,6-diaminoheptanedioateC7H14N2O4Chemical structure of meso-2,6-diaminoheptanedioate922-54-3
Average190.1971Da
Monoisotopic190.0953569Da

Displaying 1–10 of 19 metabolites