Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230810 bp
Thymine Count
1225375 bp
Guanine Count
1722066 bp
Cytosine Count
1735393 bp
Genome Length
5913644 bp
Protein-coding Genes
5727 genes
Non-Coding Genes
105 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) (pnpase) | AGR1C_Cc10022 | Not Available | - | 20763 - 22910 | 77589.2 |
| 30s ribosomal subunit protein s15 | AGR1C_Cc10023 | Not Available | - | 23182 - 23451 | 10066.1 |
| trna pseudouridine synthase b (trna pseudouridine 55 synthase) (psi55 synthase) (trna-uridine isomerase) (trna pseudouridylate synthase) | AGR1C_Cc10024 | Not Available | - | 23615 - 24562 | 34767.6 |
| ribosome-binding factor a | AGR1C_Cc10025 | Not Available | - | 24566 - 24982 | 15613.7 |
| translation initiation factor if-2 | AGR1C_Cc10026 | Not Available | - | 25058 - 27805 | 99117.1 |
| conserved hypothetical protein | AGR1C_Cc10027 | Not Available | - | 27908 - 28609 | 25237.4 |
| transcription elongation factor nusa | AGR1C_Cc10028 | Not Available | - | 28606 - 30222 | 60108.0 |
| ribosome maturation factor rimp | AGR1C_Cc10029 | Not Available | - | 30287 - 30883 | 21926.0 |
| mfs permease | AGR1C_Cc10030 | Not Available | + | 31171 - 32799 | 59365.0 |
| conserved hypothetical protein | AGR1C_Cc10031 | Not Available | + | 32886 - 33347 | 18108.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


