Helicobacter pylori HUP-B14

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori HUP-B14 is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and single-cell arrangement. This strain thrives at an optimal temperature of 37.0°C, which aligns with the physiological conditions of its natural habitat, the host stomach. As a member of the Helicobacter genus, HUP-B14 is associated with the gastric environment, where it may play a role in the complex interactions between the host's immune system and the gastric microbiota. The microaerophilic nature of HUP-B14 indicates its requirement for reduced levels of oxygen, which is typical for bacteria inhabiting the acidic and oxygen-limited environment of the stomach. This adaptation not only influences its survival but may also affect its metabolic processes and interactions with the host. The single-cell arrangement suggests a lifestyle that could facilitate motility and colonization within the gastric mucosa. Understanding the traits of Helicobacter pylori HUP-B14 can provide insights into its ecological niche within the human gastrointestinal tract. The unique combination of its Gram-negative nature, spiral morphology, and microaerophilic requirements suggests a highly specialized organism that may contribute to the intricate balance of microbial communities in the stomach, potentially influencing digestive health and disease states in the host.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainHUP-B14

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori HUP-B14
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pylori HUP-B14


Gene Summary

Adenine Count

2084 bp

Thymine Count

3189 bp

Guanine Count

1627 bp

Cytosine Count

1404 bp

Genome Length

8304 bp

Protein-coding Genes

6 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinHPB14_RS08215Not Available-276 - 4436706.04
fic family proteinHPB14_RS07710Not Available-1003 - 173128412.1
replication initiation proteinHPB14_RS07715Not Available-1744 - 335763370.6
hypothetical proteinHPB14_RS08220Not Available-4398 - 45656706.04
fic family proteinHPB14_RS07725Not Available-5125 - 585328412.1
replication initiation proteinHPB14_RS07730Not Available-5866 - 746462684.9
transcription antitermination factor nusbHPB14_RS00005Not Available-11 - 42715491.9
6,7-dimethyl-8-ribityllumazine synthaseHPB14_RS00010Not Available-429 - 89916959.7
3-deoxy-8-phosphooctulonate synthaseHPB14_RS00015Not Available-909 - 173930364.6
carbonic anhydraseHPB14_RS00020Not Available-1726 - 239125654.6

Displaying genes 1 – 10 of 1549 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0003346(2R)-2-phosphoglycerateC3H4O7PChemical structure of (2R)-2-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003701L-methionine (S)-S-oxideC5H11NO3SChemical structure of L-methionine (S)-S-oxide62697-73-8
Average165.21Da
Monoisotopic165.045964392Da

Displaying 1–4 of 4 metabolites