Erwinia piriflorinigrans CFBP 5888 str. CFBP5888

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Erwinia

Description

Erwinia piriflorinigrans CFBP 5888 str. CFBP5888 is a Gram-negative, rod-shaped bacterium that does not form spores and thrives optimally at a temperature of 25.0°C. As a facultative aerobe/anaerobe, this microbe is capable of growth in both the presence and absence of oxygen, which suggests a versatile metabolic capacity that may allow it to inhabit a variety of environments. The rod morphology of E. piriflorinigrans is characteristic of its genus, which is noted for its diverse metabolic pathways and ecological interactions. The organism's inability to form spores indicates a reliance on environmental conditions for survival and growth, highlighting its potential susceptibility to changes in habitat or resource availability. Given its optimal growth temperature, E. piriflorinigrans is likely well adapted to temperate environments, where it may play a role in the degradation of organic matter or interact with plant systems. This adaptability in varied oxygen conditions suggests a potential for ecological versatility, which could be significant in the context of nutrient cycling within its ecosystem. Further studies could illuminate its specific ecological interactions and contributions to microbial communities in natural or agricultural settings.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusErwinia
SpeciesErwinia piriflorinigrans
StrainCFBP 5888 CFBP5888

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Erwinia piriflorinigrans CFBP 5888 str. CFBP5888
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Erwinia piriflorinigrans CFBP 5888 str. CFBP5888


Gene Summary

Adenine Count

924927 bp

Thymine Count

926079 bp

Guanine Count

1038573 bp

Cytosine Count

1041076 bp

Genome Length

3930655 bp

Protein-coding Genes

3759 genes

Non-Coding Genes

113 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinEPIR_0068Not Available-78477 - 786506554.91
Putative anti-immunity proteinEPIR_0069Not Available-78650 - 7923721958.5
hypothetical proteinEPIR_0070Not Available-79253 - 7966915672.6
prophage cp4-57 transcriptional regulator protein, alpa familyEPIR_0071Not Available-79669 - 798938086.8
putative phage-related proteinEPIR_0072Not Available-79997 - 8090234202.4
Putative integrase proteinEPIR_0073Not Available-81010 - 8233850947.9
AttrNot AvailableNot Available+82410 - 82461Not Available
Putative transposaseEPIR_3108Not Available+3219520 - 32197086901.43
hypothetical proteinEPIR_3109Not Available-3220072 - 322077326711.7
hypothetical proteinEPIR_3110Not Available-3221217 - 322154012339.6

Displaying genes 11 – 20 of 3872 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

238 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da
BASm00006985-dehydro-2-deoxy-D-gluconateC6H9O6Chemical structure of 5-dehydro-2-deoxy-D-gluconateNot available
Average177.133Da
Monoisotopic177.04046159Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da

Displaying 1–10 of 238 metabolites