Thermosipho africanus H17ap60334

anaerobic

Kingdom

Thermotogati

Phylum

Thermotogota

Class

Thermotogae

Order

Thermotogales

Family

Fervidobacteriaceae

Genus

Thermosipho

Description

Taxonomy

KingdomThermotogati
PhylumThermotogota
ClassThermotogae
OrderThermotogales
FamilyFervidobacteriaceae
GenusThermosipho
SpeciesThermosipho africanus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thermosipho africanus H17ap60334

Accession NumberAJIP00000000.1

Gene Summary

Adenine Count

715891 bp

Thymine Count

729165 bp

Guanine Count

327487 bp

Cytosine Count

311008 bp

Genome Length

2083551 bp

Protein-coding Genes

1917 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
translation initiation factor if-1H17ap60334_03085Not Available+554124 - 5543488484.63
50s ribosomal protein l36H17ap60334_03090Not Available+554369 - 5544854510.69
30s ribosomal protein s13H17ap60334_03095Not Available+554498 - 55486614095.3
30s ribosomal protein s11H17ap60334_03100Not Available+554879 - 55526813887.2
30s ribosomal protein s4H17ap60334_03105Not Available+555282 - 55591124503.6
dna-directed rna polymerase subunit alphaH17ap60334_03110Not Available+555918 - 55691037548.0
50s ribosomal protein l17H17ap60334_03115Not Available+556912 - 55729514685.2
trigger factorH17ap60334_03120Not Available+557335 - 55864251051.5
atp-dependent clp protease proteolytic subunitH17ap60334_03125Not Available+558626 - 55923122408.2
hypothetical proteinH17ap60334_03130Not Available+559280 - 56003827904.2

Displaying genes 581 – 590 of 1987 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

39 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002198beta-D-ribofuranoseC5H10O5Chemical structure of beta-D-ribofuranose50-69-1
Average150.1299Da
Monoisotopic150.05282343Da
BASm0002749ADP-alpha-D-glucoseC16H23N5O15P2Chemical structure of ADP-alpha-D-glucoseNot available
Average587.329Da
Monoisotopic587.0676862Da
BASm0002751(S)-4-amino-5-oxopentanoateC5H9NO3Chemical structure of (S)-4-amino-5-oxopentanoateNot available
Average131.1299Da
Monoisotopic131.0582432Da
BASm0002826(2R)-3-phospho-glyceroyl phosphateC3H4O10P2Chemical structure of (2R)-3-phospho-glyceroyl phosphateNot available
Average262.005Da
Monoisotopic261.9301646Da
BASm0002833FMNH2C17H21N4O9PChemical structure of FMNH25666-16-0
Average456.3438Da
Monoisotopic456.1046148Da

Displaying 1–10 of 39 metabolites