Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum sp. CF444
Accession NumberAKJW00000000.1
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase | PMI16_00583 | B2UFY4 | + | 679781 - 680626 | 29626.2 |
| zn-dependent oligopeptidase | PMI16_00584 | P27237 | + | 680635 - 682722 | 78183.2 |
| dna polymerase iii, chi subunit | PMI16_00585 | O68823 | + | 682969 - 683388 | 15933.0 |
| hypothetical protein | PMI16_00586 | Not Available | + | 683400 - 683939 | 20266.8 |
| glycine/d-amino acid oxidase, deaminating | PMI16_00587 | Q479B1 | + | 684089 - 685396 | 47633.9 |
| aspartyl/asparaginyl beta-hydroxylase-like dioxygenase | PMI16_00588 | Not Available | + | 685639 - 686538 | 34748.9 |
| diguanylate cyclase (ggdef) domain-containing protein | PMI16_00589 | Not Available | + | 687088 - 688128 | 39883.2 |
| l-asparaginase type ii family protein | PMI16_00590 | Q88K39 | + | 688376 - 689446 | 38203.8 |
| putative membrane-associated protein | PMI16_00591 | P0ABP7 | - | 689581 - 690222 | 23636.7 |
| penicillin-binding protein, beta-lactamase class c | PMI16_00592 | Not Available | - | 690337 - 691539 | 43013.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.