Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum sp. CF444
Accession NumberAKJW00000000.1
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | PMI16_00986 | Q9EXL7 | - | 1149888 - 1150793 | 34143.1 |
| arabinose efflux permease family protein | PMI16_00987 | Q9I6Q3 | + | 1150952 - 1152268 | 46737.5 |
| homogentisate 1,2-dioxygenase | PMI16_00988 | A0K4Z6 | + | 1152300 - 1153652 | 50022.1 |
| fumarylacetoacetase | PMI16_00989 | A5PKH3 | + | 1153649 - 1154983 | 47479.2 |
| maleylacetoacetate isomerase | PMI16_00990 | O86043 | + | 1155020 - 1155670 | 24287.3 |
| diguanylate cyclase (ggdef) domain-containing protein | PMI16_00991 | Not Available | + | 1156102 - 1158063 | 73345.2 |
| acyl dehydratase | PMI16_00992 | Not Available | - | 1158060 - 1158527 | 17039.5 |
| putative transcriptional regulator | PMI16_00993 | P9WMG2 | + | 1158619 - 1159215 | 22037.4 |
| transcriptional regulator | PMI16_00994 | Not Available | + | 1159370 - 1159804 | 16112.4 |
| sugar phosphate permease | PMI16_00995 | Not Available | + | 1159904 - 1161202 | 46460.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.