Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum sp. CF444
Accession NumberAKJW00000000.1
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| periplasmic component of amino acid abc-type transporter/signal transduction system | PMI16_00966 | Not Available | + | 1126216 - 1127097 | 32917.6 |
| pas domain s-box/diguanylate cyclase (ggdef) domain-containing protein | PMI16_00967 | Not Available | + | 1127094 - 1130207 | 115732.0 |
| glutathione s-transferase | PMI16_00968 | Not Available | + | 1130214 - 1130915 | 26151.5 |
| hypothetical protein | PMI16_00969 | Not Available | - | 1131156 - 1131425 | 9843.67 |
| dna-binding domain-containing protein, arac-type | PMI16_00970 | Not Available | + | 1131584 - 1132387 | 29585.7 |
| dmt(drug/metabolite transporter) superfamily permease | PMI16_00971 | Not Available | + | 1132475 - 1133443 | 34235.5 |
| putative signal transduction protein | PMI16_00972 | Not Available | + | 1133572 - 1134516 | 34279.1 |
| bacteriophytochrome (light-regulated signal transduction histidine kinase) | PMI16_00973 | Not Available | + | 1134844 - 1136475 | 60266.3 |
| response regulator with chey-like receiver domain and winged-helix dna-binding domain | PMI16_00974 | Not Available | + | 1136468 - 1136923 | 16937.3 |
| response regulator with chey-like receiver, aaa-type atpase, and dna-binding domains | PMI16_00975 | Not Available | + | 1136920 - 1137312 | 14653.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.