Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum sp. CF444
Accession NumberAKJW00000000.1
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc-type xylose transport system, periplasmic component | PMI16_00906 | P54083 | + | 1056452 - 1057525 | 38554.7 |
| abc-type sugar transport system, atpase component | PMI16_00907 | Q9S472 | + | 1057740 - 1059287 | 56631.6 |
| abc-type xylose transport system, permease component | PMI16_00908 | Not Available | + | 1059274 - 1060488 | 43163.4 |
| dihydroxyacid dehydratase/phosphogluconate dehydratase | PMI16_00909 | Q1JUQ1 | + | 1060597 - 1062345 | 62671.6 |
| hypothetical protein | PMI16_00910 | Not Available | + | 1062359 - 1063357 | 36046.8 |
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI16_00911 | Q9A9Z0 | + | 1063382 - 1064158 | 28116.5 |
| hypothetical protein | PMI16_00912 | Not Available | + | 1064278 - 1064544 | 10457.1 |
| hypothetical protein | PMI16_00913 | Not Available | + | 1064531 - 1064818 | 10381.5 |
| transcriptional regulator | PMI16_00914 | P52661 | - | 1064895 - 1065836 | 35018.9 |
| outer membrane protein (porin) | PMI16_00915 | Not Available | + | 1066130 - 1067239 | 38659.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.