Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum sp. CF444
Accession NumberAKJW00000000.1
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase (ggdef) domain-containing protein | PMI16_00866 | Not Available | + | 1006475 - 1007938 | 54107.4 |
| hydantoin racemase | PMI16_00867 | Q00924 | - | 1007950 - 1008657 | 24834.9 |
| abc-type branched-chain amino acid transport system, atpase component | PMI16_00868 | Not Available | - | 1008740 - 1009504 | 27252.5 |
| abc-type branched-chain amino acid transport system, atpase component | PMI16_00869 | Not Available | - | 1009501 - 1010337 | 29945.1 |
| abc-type branched-chain amino acid transport system, permease component | PMI16_00870 | Not Available | - | 1010334 - 1011284 | 34255.1 |
| branched-chain amino acid abc-type transport system, permease component | PMI16_00871 | P21627 | - | 1011338 - 1012204 | 30330.4 |
| abc-type branched-chain amino acid transport system, periplasmic component | PMI16_00872 | Not Available | - | 1012533 - 1013723 | 42438.4 |
| outer membrane protein (porin) | PMI16_00873 | Not Available | - | 1013838 - 1014956 | 38857.7 |
| transcriptional regulator | PMI16_00874 | Not Available | + | 1015554 - 1016285 | 27053.8 |
| outer membrane protein (porin) | PMI16_00875 | Not Available | + | 1016825 - 1017922 | 38244.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.