Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum sp. CF444
Accession NumberAKJW00000000.1
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pp_00747 | PMI16_00766 | Not Available | - | 884504 - 885844 | Not Available |
| transcriptional regulator | PMI16_00767 | Not Available | - | 886144 - 887079 | 34514.6 |
| nicotinamidase-like amidase | PMI16_00768 | P96654 | + | 887122 - 887724 | 20907.2 |
| response regulator with chey-like receiver domain and winged-helix dna-binding domain | PMI16_00769 | Not Available | + | 888246 - 888815 | 21657.2 |
| diguanylate cyclase (ggdef) domain-containing protein | PMI16_00770 | Q9I310 | + | 888922 - 889509 | 21300.3 |
| Trna-met | Not Available | Not Available | + | 889682 - 889758 | Not Available |
| trna isopentenyltransferase miaa | PMI16_00772 | A6SV54 | - | 889861 - 890820 | 35188.6 |
| dna mismatch repair protein mutl | PMI16_00773 | A4G289 | - | 890822 - 892708 | 67946.6 |
| methyl-accepting chemotaxis protein | PMI16_00774 | Not Available | - | 892793 - 894934 | 75970.4 |
| pas domain s-box/diguanylate cyclase (ggdef) domain-containing protein | PMI16_00775 | Not Available | - | 895216 - 898185 | 110865.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.