Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum sp. CF444
Accession NumberAKJW00000000.1
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box/diguanylate cyclase (ggdef) domain-containing protein | PMI16_00064 | Q55434 | - | 63920 - 64864 | 35995.2 |
| lysophospholipase | PMI16_00065 | Not Available | - | 65018 - 65962 | 34820.0 |
| putative enzyme involved in biosynthesis of extracellular polysaccharides | PMI16_00066 | P54563 | - | 66065 - 66400 | 12336.5 |
| hypothetical protein | PMI16_00067 | Not Available | - | 66440 - 66679 | 8704.91 |
| indolepyruvate ferredoxin oxidreductase, alpha/beta subunit | PMI16_00068 | Not Available | + | 66936 - 70589 | 132434.0 |
| acyl-coa dehydrogenase | PMI16_00069 | Q9D7B6 | + | 70849 - 72009 | 41644.9 |
| enoyl-coa hydratase/carnithine racemase | PMI16_00070 | P52046 | + | 72006 - 72788 | 28188.8 |
| small-conductance mechanosensitive channel | PMI16_00071 | Not Available | + | 72960 - 74105 | 41948.8 |
| hypothetical protein | PMI16_00072 | Not Available | - | 74112 - 74639 | 19326.1 |
| Trna-trp | Not Available | Not Available | + | 75146 - 75221 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.