Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum sp. CF444
Accession NumberAKJW00000000.1
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| site-specific recombinase xerd | PMI16_00563 | P10487 | - | 656191 - 657177 | 37623.8 |
| trna dihydrouridine synthase a | PMI16_00564 | Q87L85 | + | 657399 - 658367 | 35744.0 |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase | PMI16_00565 | Q9JZ77 | + | 658453 - 659565 | 40143.4 |
| 6,7-dimethyl-8-ribityllumazine synthase | PMI16_00566 | B2T6D0 | + | 659668 - 660153 | 17054.2 |
| transcription antitermination factor nusb | PMI16_00567 | Q8Y1H9 | + | 660261 - 660722 | 16991.2 |
| pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component | PMI16_00568 | Q59098 | - | 660723 - 661012 | 9793.79 |
| pyruvate dehydrogenase e1 component, homodimeric type | PMI16_00569 | Q59637 | - | 661159 - 663855 | 100480.0 |
| protein of unknown function (duf1338) | PMI16_00570 | Not Available | + | 664275 - 665351 | 38884.3 |
| fad/fmn-dependent dehydrogenase | PMI16_00571 | P46681 | + | 665341 - 666747 | 50828.6 |
| transcriptional regulator | PMI16_00572 | P0A9F8 | + | 666883 - 667767 | 32987.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.