Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum sp. CF444
Accession NumberAKJW00000000.1
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI16_05052 | Not Available | + | 5576714 - 5576788 | 2959.6 |
| hypothetical protein | PMI16_05053 | Not Available | - | 5576789 - 5576884 | 3343.8 |
| small subunit of phenylpropionate dioxygenase | PMI16_05054 | Q84BZ2 | - | 5576893 - 5577366 | 18439.8 |
| ring-hydroxylating dioxygenase, large terminal subunit | PMI16_05055 | Q84BZ3 | - | 5577381 - 5578661 | 48375.3 |
| enolase superfamily enzyme related to l-alanine-dl-glutamate epimerase | PMI16_05056 | O33949 | + | 5579005 - 5580195 | 42699.7 |
| muconolactone delta-isomerase | PMI16_05057 | O33947 | + | 5580238 - 5580528 | 11146.5 |
| catechol 1,2-dioxygenase, proteobacterial | PMI16_05058 | O33950 | + | 5580620 - 5581531 | 33865.9 |
| putative hydrolase or acyltransferase of alpha/beta superfamily | PMI16_05059 | P00632 | + | 5581647 - 5582417 | 27186.4 |
| transcriptional regulator | PMI16_05060 | P20667 | - | 5582444 - 5583349 | 33580.1 |
| dna-binding domain-containing protein, arac-type | PMI16_05061 | Not Available | + | 5583826 - 5584836 | 37138.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.