Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum sp. CF444
Accession NumberAKJW00000000.1
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trap-type c4-dicarboxylate transport system, small permease component | PMI16_05012 | Not Available | + | 5538125 - 5538679 | 20441.3 |
| trap transporter, dctm subunit | PMI16_05013 | Q9HU16 | + | 5538676 - 5540025 | 47775.9 |
| malonate decarboxylase, alpha subunit | PMI16_05014 | O06924 | + | 5540026 - 5541702 | 61056.5 |
| malonate decarboxylase acyl carrier protein | PMI16_05015 | B2FSQ5 | + | 5541704 - 5542015 | 11153.4 |
| malonate decarboxylase, beta subunit | PMI16_05016 | O06926 | + | 5542012 - 5542926 | 31955.5 |
| malonate decarboxylase, gamma subunit | PMI16_05017 | Not Available | + | 5542923 - 5543639 | 25603.8 |
| malonate decarboxylase holo-(acyl-carrier-protein) synthase | PMI16_05018 | Not Available | + | 5543623 - 5544324 | 26307.4 |
| triphosphoribosyl-dephospho-coa synthase mdcb | PMI16_05019 | Q9RGM3 | + | 5544312 - 5545274 | 34201.0 |
| (acyl-carrier-protein) s-malonyltransferase | PMI16_05020 | A0A2I2F262 | + | 5545271 - 5546203 | 32815.4 |
| bacteriophytochrome (light-regulated signal transduction histidine kinase) | PMI16_05021 | E5KK10 | + | 5546550 - 5547911 | 50817.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.