Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum sp. CF444
Accession NumberAKJW00000000.1
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase (ggdef) domain-containing protein | PMI16_05002 | Not Available | + | 5526569 - 5527678 | 41075.4 |
| hypothetical protein | PMI16_05003 | A3N2T3 | - | 5527715 - 5529553 | 68063.4 |
| threonine dehydratase, medium form | PMI16_05004 | Q74FW6 | - | 5529744 - 5530943 | 42431.5 |
| methyl-accepting chemotaxis protein | PMI16_05005 | P21822 | - | 5531243 - 5531679 | 14865.5 |
| outer membrane protein (porin) | PMI16_05006 | Not Available | + | 5531753 - 5532874 | 40202.0 |
| na+/melibiose symporter-like transporter | PMI16_05007 | A4QH18 | + | 5532966 - 5534318 | 48054.3 |
| metabolite-proton symporter | PMI16_05008 | P76350 | + | 5534346 - 5535695 | 47962.4 |
| lysr family regulator | PMI16_05009 | Not Available | + | 5535843 - 5536097 | 9273.15 |
| transcriptional regulator | PMI16_05010 | P37338 | - | 5536113 - 5536817 | 26324.8 |
| trap-type c4-dicarboxylate transport system, periplasmic component | PMI16_05011 | Q21XD7 | + | 5537103 - 5538128 | 36750.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.