Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum sp. CF444
Accession NumberAKJW00000000.1
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thiosulfate reductase cytochrome b subunit (membrane anchoring protein) | PMI16_04901 | G8QM62 | + | 5419861 - 5420484 | 22948.8 |
| sulfite oxidase-like oxidoreductase | PMI16_04902 | G8QM63 | + | 5420481 - 5421257 | 28963.6 |
| fad-dependent dehydrogenase | PMI16_04903 | Q05627 | - | 5421265 - 5422884 | 58556.3 |
| putative membrane protein | PMI16_04904 | O33683 | - | 5423081 - 5424277 | 44253.6 |
| hypothetical protein | PMI16_04905 | Not Available | + | 5424565 - 5424666 | 3371.21 |
| ppox class probable fmn-dependent enzyme, dr_2398 family | PMI16_04906 | Not Available | - | 5424982 - 5425608 | 22745.1 |
| trna u-34 5-methylaminomethyl-2-thiouridine biosynthesis protein mnmc | PMI16_04907 | Q13SL2 | - | 5425655 - 5427451 | 65152.6 |
| putative permease | PMI16_04908 | O27435 | + | 5427593 - 5428525 | 33145.0 |
| hypothetical protein | PMI16_04909 | Not Available | + | 5428553 - 5429356 | 29819.3 |
| pas domain s-box/diguanylate cyclase (ggdef) domain-containing protein | PMI16_04910 | Not Available | - | 5429367 - 5432228 | 107300.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.