Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum sp. CF444
Accession NumberAKJW00000000.1
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-diphosphate-sugar epimerase | PMI16_04721 | Q57664 | + | 5210608 - 5211603 | 36692.9 |
| putative plp-dependent enzyme possibly involved in cell wall biogenesis | PMI16_04722 | Q9ZGH4 | + | 5211604 - 5212707 | 40214.1 |
| glycosyl transferase | PMI16_04723 | P0A5A0 | + | 5212782 - 5213726 | 34593.3 |
| glycosyltransferase | PMI16_04724 | Not Available | + | 5214009 - 5215061 | 38908.3 |
| glycosyltransferase | PMI16_04725 | Not Available | + | 5215126 - 5216373 | 44958.3 |
| dtdp-4-dehydrorhamnose reductase | PMI16_04726 | Not Available | + | 5216370 - 5217236 | 31111.6 |
| putative nucleoside-diphosphate sugar epimerase | PMI16_04727 | A8GRN9 | + | 5217320 - 5218330 | 37279.0 |
| udp-n-acetylglucosamine 2-epimerase | PMI16_04728 | Q58899 | + | 5218323 - 5219450 | 42552.2 |
| hypothetical protein | PMI16_04729 | Not Available | + | 5219577 - 5222009 | 89299.2 |
| hypothetical protein | PMI16_04730 | Not Available | + | 5221996 - 5223468 | 54709.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.