Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum sp. CF444
Accession NumberAKJW00000000.1
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoheptose isomerase | PMI16_04701 | B2UNE0 | + | 5191399 - 5191989 | 20908.0 |
| dtdp-d-glucose 4,6-dehydratase | PMI16_04702 | Q9L9E8 | + | 5191989 - 5192984 | 37267.1 |
| putative plp-dependent enzyme possibly involved in cell wall biogenesis | PMI16_04703 | P15263 | + | 5193014 - 5194168 | 42491.8 |
| putative plp-dependent enzyme possibly involved in cell wall biogenesis | PMI16_04704 | Not Available | + | 5194161 - 5195267 | 40203.3 |
| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit | PMI16_04705 | P51267 | + | 5195383 - 5196351 | 35708.6 |
| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit | PMI16_04706 | Q0J0H4 | + | 5196352 - 5197413 | 38511.5 |
| hypothetical protein | PMI16_04707 | Not Available | + | 5197425 - 5197745 | 11766.9 |
| hypothetical protein | PMI16_04708 | Not Available | + | 5197748 - 5198419 | 25135.0 |
| radical sam superfamily enzyme | PMI16_04709 | Not Available | + | 5198428 - 5199552 | 42551.2 |
| phytanoyl-coa dioxygenase (phyh) | PMI16_04710 | Not Available | + | 5199571 - 5200329 | 28640.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.