Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum sp. CF444
Accession NumberAKJW00000000.1
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad dependent epimerase/dehydratase, llpsf_edh_00030 family | PMI16_04691 | P0C7J0 | + | 5181889 - 5182884 | 36341.0 |
| aminotransferase, llpsf_nht_00031 family | PMI16_04692 | Q9A9H3 | + | 5182877 - 5184055 | 42498.1 |
| udp-n-acetyl-d-glucosamine 2-epimerase, udp-hydrolysing | PMI16_04693 | Q0P8T0 | + | 5184052 - 5185221 | 41999.7 |
| n-acetylneuraminate synthase | PMI16_04694 | Q0P8T1 | + | 5185214 - 5186293 | 38468.0 |
| sugar o-acyltransferase, sialic acid o-acetyltransferase neud family | PMI16_04695 | Not Available | + | 5186335 - 5186919 | 19306.7 |
| nucleoside-diphosphate-sugar pyrophosphorylase family protein | PMI16_04696 | Q7JZB4 | + | 5186919 - 5187968 | 39582.9 |
| putative dehydrogenase | PMI16_04697 | Not Available | + | 5187965 - 5188882 | 33672.0 |
| cmp-n-acetylneuraminic acid synthetase | PMI16_04698 | Q45982 | + | 5188879 - 5189586 | 25666.9 |
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI16_04699 | Q45983 | + | 5189597 - 5190370 | 27981.5 |
| nucleoside-diphosphate-sugar epimerase | PMI16_04700 | Q0A4T8 | + | 5190452 - 5191402 | 35137.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.