Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum sp. CF444
Accession NumberAKJW00000000.1
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate permease | PMI16_04617 | P0DPR4 | - | 5101027 - 5102343 | 47240.0 |
| transcriptional regulator | PMI16_04618 | P32425 | + | 5102599 - 5103309 | 26133.4 |
| pas domain s-box/diguanylate cyclase (ggdef) domain-containing protein | PMI16_04619 | Not Available | - | 5103426 - 5105462 | 75477.3 |
| putative signal transduction protein containing eal and modified hd-gyp domain containing protein | PMI16_04620 | Not Available | - | 5105467 - 5106666 | 44241.6 |
| putative oxygen-independent coproporphyrinogen iii oxidase | PMI16_04621 | P52062 | - | 5106808 - 5108064 | 46397.4 |
| non-canonical purine ntp pyrophosphatase, rdgb/ham1 family | PMI16_04622 | Q8XXF4 | - | 5108061 - 5108645 | 20584.2 |
| short-chain dehydrogenase, teichoic and lipoteichoic acid d-alanine esterification | PMI16_04623 | Not Available | - | 5108928 - 5109039 | 3739.58 |
| short-chain dehydrogenase of unknown substrate specificity | PMI16_04624 | Q8AVY8 | - | 5109073 - 5109873 | 28203.7 |
| transcriptional regulator containing an amidase domain and an arac-type dna-binding hth domain | PMI16_04625 | Q9HTH5 | + | 5110030 - 5110986 | 35849.0 |
| hypothetical protein | PMI16_04626 | Not Available | - | 5110999 - 5111616 | 21752.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.