Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum sp. CF444
Accession NumberAKJW00000000.1
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | PMI16_04567 | P44446 | - | 5041122 - 5043032 | 69049.4 |
| enoyl-coa hydratase/carnithine racemase | PMI16_04568 | Q5LLW6 | - | 5043093 - 5043878 | 27904.6 |
| abc-type branched-chain amino acid transport system, periplasmic component | PMI16_04569 | Q8YC99 | - | 5044258 - 5045433 | 41877.9 |
| outer membrane protein (porin) | PMI16_04570 | Not Available | + | 5046108 - 5047214 | 37757.9 |
| beta-ketoadipate pathway transcriptional regulator, pcar/pcau/pobr family | PMI16_04571 | Not Available | - | 5047348 - 5048250 | 32469.2 |
| 3-oxoacid coa-transferase, a subunit | PMI16_04572 | Q01103 | + | 5048659 - 5049336 | 24056.1 |
| 3-oxoacid coa-transferase, b subunit | PMI16_04573 | Q59091 | + | 5049336 - 5049977 | 22635.2 |
| 3-oxoadipyl-coa thiolase | PMI16_04574 | Q51956 | + | 5050014 - 5051216 | 41639.2 |
| branched-chain amino acid abc-type transport system, permease component | PMI16_04575 | Not Available | + | 5051392 - 5052258 | 30319.4 |
| abc-type branched-chain amino acid transport system, permease component | PMI16_04576 | Not Available | + | 5052255 - 5053319 | 37435.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.