Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum sp. CF444
Accession NumberAKJW00000000.1
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | PMI16_04298 | P37773 | - | 4753575 - 4754987 | 50720.7 |
| hypothetical protein | PMI16_04299 | Not Available | + | 4755076 - 4755693 | 22665.8 |
| thiol-disulfide isomerase-like thioredoxin | PMI16_04300 | O31820 | + | 4755693 - 4756226 | 19320.6 |
| 3-dehydroquinate dehydratase, type ii | PMI16_04301 | A4G8P1 | + | 4756302 - 4756739 | 15554.7 |
| acetyl-coa carboxylase, biotin carboxyl carrier protein | PMI16_04302 | P0ABE0 | + | 4756875 - 4757342 | 16330.8 |
| acetyl-coa carboxylase, biotin carboxylase subunit | PMI16_04303 | O52058 | + | 4757507 - 4758886 | 51001.6 |
| ribosomal protein l11 methyltransferase | PMI16_04304 | A6T2B6 | + | 4758901 - 4759815 | 32693.6 |
| protein of unknown function (duf3426) | PMI16_04305 | Not Available | + | 4759904 - 4761136 | 43710.2 |
| sugar kinase, ribokinase | PMI16_04306 | P83736 | + | 4761238 - 4762173 | 33480.9 |
| peroxiredoxin | PMI16_04307 | P0C5D4 | + | 4762272 - 4762826 | 19944.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.