Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum sp. CF444
Accession NumberAKJW00000000.1
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thiamine biosynthesis protein thic | PMI16_04257 | A6SUX7 | - | 4712170 - 4714095 | 71462.4 |
| hypothetical protein | PMI16_04258 | Not Available | + | 4714154 - 4714372 | 8345.13 |
| trap transporter, dctm subunit | PMI16_04260 | Not Available | - | 4714379 - 4716241 | 65313.9 |
| tripartite atp-independent periplasmic transporter solute receptor, dctp family | PMI16_04261 | P37676 | - | 4716238 - 4717278 | 38354.9 |
| transketolase, alpha subunit | PMI16_04262 | P55573 | - | 4717357 - 4718388 | 37044.1 |
| transketolase, beta subunit | PMI16_04263 | P55574 | - | 4718385 - 4719224 | 31001.0 |
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI16_04264 | P55575 | - | 4719234 - 4719983 | 25895.6 |
| transcriptional regulator | PMI16_04265 | Q57083 | + | 4720173 - 4721060 | 33081.9 |
| valyl-trna synthetase | PMI16_04266 | A6SUQ8 | + | 4721142 - 4724081 | 110525.0 |
| hypothetical protein | PMI16_04267 | Not Available | + | 4724272 - 4724736 | 16722.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.