Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum sp. CF444
Accession NumberAKJW00000000.1
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| enolase superfamily enzyme related to l-alanine-dl-glutamate epimerase | PMI16_04247 | Q0QWS4 | + | 4701739 - 4703016 | 47161.0 |
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI16_04248 | Q9X248 | + | 4703059 - 4703835 | 27767.2 |
| hypothetical protein | PMI16_04249 | Not Available | + | 4703846 - 4704184 | 12990.7 |
| abc-type sugar transport system, atpase component | PMI16_04250 | Q0B775 | + | 4704267 - 4705820 | 56643.0 |
| permease component of ribose/xylose/arabinose/galactoside abc-type transporters | PMI16_04251 | P36948 | + | 4705831 - 4706883 | 37014.2 |
| abc-type sugar transport system, periplasmic component | PMI16_04252 | Q9I2F8 | + | 4707111 - 4708052 | 33317.3 |
| putative tim-barrel fold metal-dependent hydrolase | PMI16_04253 | P55567 | + | 4708172 - 4709044 | 32521.6 |
| thiamine-phosphate pyrophosphorylase | PMI16_04254 | A6SUR1 | - | 4709249 - 4709878 | 22568.0 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | PMI16_04255 | Q9ZBR6 | - | 4709875 - 4710693 | 29224.8 |
| putative enzyme of thiazole biosynthesis | PMI16_04256 | Q5P5J1 | - | 4710702 - 4711511 | 28447.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.