Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum sp. CF444
Accession NumberAKJW00000000.1
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc-type branched-chain amino acid transport system, atpase component | PMI16_04077 | Not Available | + | 4508644 - 4509369 | 25904.8 |
| sugar phosphate isomerase/epimerase | PMI16_04078 | Q88JU3 | - | 4509569 - 4510456 | 32504.1 |
| shikimate 5-dehydrogenase | PMI16_04079 | A4J3A0 | - | 4510453 - 4511298 | 30436.2 |
| 4-hydroxyphenylpyruvate dioxygenase/hemolysin-like protein | PMI16_04080 | P80064 | - | 4511291 - 4512205 | 33722.2 |
| transcriptional regulator | PMI16_04081 | Q0K846 | + | 4512337 - 4513119 | 28771.1 |
| dna-binding ferritin-like protein (oxidative damage protectant) | PMI16_04082 | P73321 | - | 4513308 - 4513796 | 17914.6 |
| arabinose efflux permease family protein | PMI16_04083 | Q62I47 | - | 4513921 - 4515156 | 42686.8 |
| dna/rna helicase, superfamily i | PMI16_04084 | P03018 | + | 4515332 - 4517629 | 85447.6 |
| theronine dehydrogenase-like zn-dependent dehydrogenase | PMI16_04085 | P39346 | + | 4517844 - 4518875 | 36676.4 |
| methyl-accepting chemotaxis protein | PMI16_04086 | Not Available | + | 4518929 - 4520551 | 58165.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.