Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum sp. CF444
Accession NumberAKJW00000000.1
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fmn-dependent oxidoreductase, nitrilotriacetate monooxygenase family | PMI16_03796 | Not Available | + | 4203546 - 4204886 | 49644.7 |
| methyl-accepting chemotaxis protein | PMI16_03797 | Not Available | - | 4204916 - 4206640 | 60451.2 |
| outer membrane protein (porin) | PMI16_03798 | Not Available | - | 4206753 - 4207838 | 37837.2 |
| flavodoxin reductase family protein | PMI16_03799 | Q52186 | - | 4208239 - 4209189 | 33813.5 |
| putative translation initiation inhibitor, yjgf family | PMI16_03800 | Not Available | - | 4209202 - 4209636 | 15620.9 |
| ring-hydroxylating dioxygenase, large terminal subunit | PMI16_03801 | O05616 | - | 4209641 - 4210687 | 39534.1 |
| hypothetical protein | PMI16_03802 | Not Available | - | 4210720 - 4210953 | 8459.9 |
| hypothetical protein | PMI16_03803 | Not Available | - | 4210953 - 4211288 | 12870.6 |
| 2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase | PMI16_03804 | E2CYT2 | - | 4211300 - 4212457 | 41826.6 |
| putative ring-cleavage extradiol dioxygenase | PMI16_03805 | Not Available | - | 4212475 - 4213446 | 36129.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.