Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum sp. CF444
Accession NumberAKJW00000000.1
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc-type dipeptide/oligopeptide/nickel transport system, permease component | PMI16_03736 | Q53191 | - | 4143455 - 4144363 | 32707.3 |
| abc-type dipeptide transport system, periplasmic component | PMI16_03737 | Q8YDG6 | - | 4144697 - 4146268 | 57269.2 |
| transcriptional regulator | PMI16_03738 | Not Available | - | 4146916 - 4147368 | 17464.1 |
| transcriptional regulator | PMI16_03739 | P0ACJ2 | - | 4147417 - 4147905 | 18507.8 |
| glycine/d-amino acid oxidase, deaminating | PMI16_03740 | B1YV52 | + | 4148011 - 4149294 | 46364.8 |
| topoisomerase ib | PMI16_03741 | Q7T6X9 | + | 4149418 - 4150725 | 49247.0 |
| arabinose efflux permease family protein | PMI16_03742 | P52067 | - | 4150786 - 4152021 | 43834.0 |
| alkylated dna repair protein | PMI16_03743 | P37462 | - | 4152137 - 4152784 | 23557.2 |
| o-6-methylguanine dna methyltransferase | PMI16_03744 | P06134 | - | 4152807 - 4153907 | 39837.4 |
| transcriptional regulator | PMI16_03745 | Not Available | - | 4154000 - 4154518 | 19247.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.