Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum sp. CF444
Accession NumberAKJW00000000.1
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc-type dipeptide/oligopeptide/nickel transport system, permease component | PMI16_03716 | Q57RB0 | + | 4119878 - 4120834 | 33697.4 |
| abc-type dipeptide/oligopeptide/nickel transport system, permease component | PMI16_03717 | Q8FWN9 | + | 4120851 - 4121777 | 32259.0 |
| atpase component of various abc-type transport systems with duplicated atpase domain | PMI16_03718 | Q0TJM0 | + | 4121777 - 4123402 | 58893.6 |
| tartrate dehydrogenase | PMI16_03719 | Not Available | + | 4123418 - 4124506 | 39325.1 |
| succinate-semialdehyde dehydrogenase | PMI16_03720 | P25526 | + | 4124540 - 4126018 | 52207.3 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | PMI16_03721 | Q53196 | + | 4126280 - 4127656 | 48950.8 |
| transcriptional regulator | PMI16_03722 | E1V7V9 | + | 4127823 - 4128317 | 19003.1 |
| cbs domain-containing protein | PMI16_03723 | A0A0F6BAS6 | - | 4128864 - 4130189 | 49528.0 |
| sulfite reductase, alpha subunit (flavoprotein) | PMI16_03724 | P38039 | - | 4130363 - 4132021 | 60078.1 |
| membrane-associated lipoprotein involved in thiamine biosynthesis | PMI16_03725 | A5F5Y3 | - | 4132018 - 4133025 | 36256.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.