Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum sp. CF444
Accession NumberAKJW00000000.1
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc-type dipeptide/oligopeptide/nickel transport system, permease component | PMI16_03706 | P51000 | - | 4108359 - 4109240 | 31076.7 |
| abc-type dipeptide/oligopeptide/nickel transport system, permease component | PMI16_03707 | Q8FJK9 | - | 4109237 - 4110193 | 33674.5 |
| abc-type dipeptide transport system, periplasmic component | PMI16_03708 | P42061 | - | 4110230 - 4111858 | 59236.0 |
| 2-haloalkanoic acid dehalogenase, type ii | PMI16_03709 | Not Available | - | 4111982 - 4112650 | 25218.1 |
| putative acyltransferase | PMI16_03710 | Not Available | + | 4113176 - 4114069 | 31510.0 |
| phosphoglycerate dehydrogenase-like oxidoreductase | PMI16_03711 | A1JRR3 | + | 4114124 - 4115050 | 33624.5 |
| haloacid dehalogenase superfamily enzyme, subfamily ia | PMI16_03712 | Not Available | + | 4115232 - 4115930 | 25683.3 |
| putative enzyme of the cupin superfamily | PMI16_03713 | Not Available | + | 4116001 - 4116360 | 12637.1 |
| glycine/d-amino acid oxidase, deaminating | PMI16_03714 | Q9Z3S3 | + | 4116865 - 4118157 | 46971.0 |
| abc-type dipeptide transport system, periplasmic component | PMI16_03715 | Not Available | + | 4118216 - 4119835 | 58597.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.