Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum sp. CF444
Accession NumberAKJW00000000.1
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| periplasmic glycine betaine/choline-binding lipoprotein of an abc-type transport system | PMI16_03696 | Q9HXC4 | - | 4097325 - 4098260 | 34787.6 |
| abc-type proline/glycine betaine transport system, permease component | PMI16_03697 | Q8ZPK1 | - | 4098257 - 4098970 | 25301.0 |
| hypothetical protein | PMI16_03698 | Not Available | - | 4099440 - 4100174 | 25744.2 |
| arabinose efflux permease family protein | PMI16_03699 | P31474 | - | 4100269 - 4101618 | 48167.2 |
| putative membrane protein | PMI16_03700 | Q54KZ0 | + | 4102021 - 4102464 | 16614.1 |
| glycine/d-amino acid oxidase, deaminating | PMI16_03701 | Not Available | - | 4102480 - 4103583 | 40077.6 |
| glycine/d-amino acid oxidase, deaminating | PMI16_03702 | Q92XP5 | - | 4103609 - 4104766 | 41489.0 |
| nad(fad)-dependent dehydrogenase | PMI16_03703 | P72300 | - | 4104763 - 4106148 | 49003.1 |
| hypothetical protein | PMI16_03704 | Not Available | - | 4106130 - 4106462 | 11891.1 |
| atpase component of various abc-type transport systems with duplicated atpase domain | PMI16_03705 | Q57RB2 | - | 4106459 - 4108354 | 67065.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.