Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum sp. CF444
Accession NumberAKJW00000000.1
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI16_03576 | Not Available | - | 3979684 - 3980262 | 20029.1 |
| hypothetical protein | PMI16_03577 | Not Available | + | 3980468 - 3980908 | 16008.1 |
| glycine/d-amino acid oxidase, deaminating | PMI16_03578 | Q89T28 | - | 3980918 - 3982186 | 45157.2 |
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI16_03579 | P73574 | - | 3982201 - 3982968 | 26269.4 |
| amine acid abc transporter, permease protein, 3-tm region, his/glu/gln/arg/opine family | PMI16_03580 | Not Available | + | 3983255 - 3983923 | 24597.8 |
| abc-type polar amino acid transport system, atpase component | PMI16_03581 | P39456 | + | 3983925 - 3984704 | 28440.8 |
| transcriptional regulator | PMI16_03582 | Q52710 | + | 3984719 - 3985165 | 16366.9 |
| p pilus assembly protein, pilin fima | PMI16_03583 | Not Available | - | 3985262 - 3986341 | 36916.0 |
| p pilus assembly protein, pilin fima | PMI16_03584 | Not Available | + | 3987060 - 3987680 | 20606.3 |
| periplasmic component of amino acid abc-type transporter/signal transduction system | PMI16_03585 | Not Available | - | 3987761 - 3988603 | 30656.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.