Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum sp. CF444
Accession NumberAKJW00000000.1
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box/diguanylate cyclase (ggdef) domain-containing protein | PMI16_00253 | Not Available | - | 267385 - 270543 | 117609.0 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | PMI16_00254 | P45382 | + | 270961 - 272067 | 39331.7 |
| s-formylglutathione hydrolase | PMI16_00255 | Q9R0P3 | + | 272069 - 272926 | 31467.6 |
| drug resistance transporter, emrb/qaca subfamily | PMI16_00256 | Not Available | - | 273001 - 274566 | 55761.1 |
| multidrug resistance efflux pump | PMI16_00257 | P27303 | - | 274584 - 275795 | 42964.1 |
| efflux transporter, outer membrane factor lipoprotein, nodt family | PMI16_00258 | Not Available | - | 275891 - 277387 | 53209.2 |
| transcriptional regulator | PMI16_00259 | Not Available | + | 277516 - 278142 | 23119.2 |
| hypothetical protein | PMI16_00260 | Not Available | + | 278264 - 278890 | 22045.7 |
| diguanylate cyclase (ggdef) domain-containing protein | PMI16_00261 | Not Available | + | 278918 - 281302 | 87418.8 |
| protein of unknown function (duf3034) | PMI16_00262 | Not Available | + | 281340 - 282287 | 33846.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.