Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum sp. CF444
Accession NumberAKJW00000000.1
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc-type dipeptide/oligopeptide/nickel transport system, permease component | PMI16_01916 | Q83S26 | - | 2162229 - 2163146 | 33174.7 |
| abc-type dipeptide transport system, periplasmic component | PMI16_01917 | P33950 | - | 2163204 - 2164766 | 57422.0 |
| transcriptional regulator | PMI16_01918 | Not Available | + | 2164963 - 2165874 | 34007.5 |
| transcriptional regulator | PMI16_01919 | O07920 | - | 2165911 - 2166420 | 18944.2 |
| 1-aminocyclopropane-1-carboxylate deaminase | PMI16_01920 | C5CQC9 | + | 2166659 - 2167675 | 36781.1 |
| hypothetical protein | PMI16_01921 | Not Available | + | 2167741 - 2167974 | 8097.54 |
| p pilus assembly protein, porin papc | PMI16_01922 | P33129 | - | 2167866 - 2170490 | 92761.4 |
| p pilus assembly protein, pilin fima | PMI16_01923 | Not Available | + | 2171110 - 2171637 | 17058.1 |
| p pilus assembly protein, chaperone papd | PMI16_01924 | Not Available | + | 2171825 - 2172610 | 29005.0 |
| dna-binding protein with hth domain containing protein | PMI16_01925 | Not Available | + | 2172611 - 2173390 | 28370.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.