Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum sp. CF444
Accession NumberAKJW00000000.1
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-aminobutyrate aminotransferase | PMI16_01846 | P50457 | + | 2095103 - 2096455 | 47395.5 |
| spermidine/putrescine abc transporter atp-binding subunit | PMI16_01847 | Q02R79 | + | 2096520 - 2097632 | 40730.4 |
| spermidine/putrescine-binding periplasmic protein | PMI16_01848 | Q9I6R6 | + | 2097681 - 2098727 | 38068.6 |
| abc-type spermidine/putrescine transport system, permease component i | PMI16_01849 | Not Available | + | 2098898 - 2100178 | 46681.9 |
| abc-type spermidine/putrescine transport system, permease component ii | PMI16_01850 | P0AFL2 | + | 2100257 - 2101117 | 30960.8 |
| succinate-semialdehyde dehydrogenase | PMI16_01851 | Q9I6M5 | + | 2101129 - 2102583 | 51441.9 |
| putative membrane protein | PMI16_01852 | Q9P6J2 | + | 2102787 - 2103494 | 24223.6 |
| cytochrome b561 | PMI16_01853 | P0ABE5 | + | 2103573 - 2104091 | 19594.7 |
| 3-methyladenine dna glycosylase | PMI16_01854 | Not Available | - | 2104128 - 2104772 | 24200.9 |
| rna polymerase sigma factor, sigma-70 family | PMI16_01855 | Not Available | + | 2104952 - 2105464 | 19402.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.