Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum sp. CF444
Accession NumberAKJW00000000.1
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein | PMI16_01755 | Not Available | + | 2004945 - 2006189 | 46079.9 |
| hypothetical protein | PMI16_01756 | Q8CWA2 | + | 2006186 - 2006957 | 27320.1 |
| transcriptional activator of acetoin/glycerol metabolism | PMI16_01757 | P28614 | - | 2007087 - 2008226 | 41383.1 |
| transcriptional regulator | PMI16_01758 | P52670 | + | 2008444 - 2009349 | 33643.7 |
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI16_01759 | A0A1L5BU05 | - | 2009359 - 2010156 | 28010.0 |
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI16_01760 | O67610 | - | 2010169 - 2010939 | 26453.7 |
| trap transporter, dctm subunit | PMI16_01761 | Q4QP40 | - | 2011012 - 2012904 | 65937.9 |
| tripartite atp-independent periplasmic transporter solute receptor, dctp family | PMI16_01762 | P44992 | - | 2012917 - 2013954 | 38345.8 |
| acetyl-coa acetyltransferase | PMI16_01763 | O26884 | + | 2014433 - 2015608 | 41323.6 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | PMI16_01764 | Q9EY88 | + | 2015777 - 2017381 | 58759.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.