Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum sp. CF444
Accession NumberAKJW00000000.1
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative taurine catabolism dioxygenase | PMI16_01695 | Q9WWU5 | + | 1931987 - 1932910 | 34132.1 |
| fmn-dependent oxidoreductase, nitrilotriacetate monooxygenase family | PMI16_01696 | Not Available | + | 1932907 - 1934277 | 50688.8 |
| arabinose efflux permease family protein | PMI16_01697 | P37643 | - | 1934355 - 1935710 | 48185.3 |
| cytochrome o ubiquinol oxidase subunit ii | PMI16_01698 | Q9WWR1 | + | 1935944 - 1936945 | 36959.9 |
| cytochrome o ubiquinol oxidase, subunit i | PMI16_01699 | P0ABJ0 | + | 1937060 - 1939063 | 74540.2 |
| cytochrome o ubiquinol oxidase, subunit iii | PMI16_01700 | Q9WWR3 | + | 1939056 - 1939691 | 23493.1 |
| cytochrome o ubiquinol oxidase subunit iv | PMI16_01701 | P0ABJ7 | + | 1939688 - 1940170 | 17795.0 |
| hypothetical protein | PMI16_01702 | Q15526 | + | 1940308 - 1941042 | 26598.5 |
| histidine kinase | PMI16_01703 | P0C0Z0 | + | 1941026 - 1942498 | 53417.8 |
| response regulator consisting of a chey-like receiver domain and a fis-type hth domain | PMI16_01704 | A6UEL7 | + | 1942488 - 1943024 | 19703.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.