Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum sp. CF444
Accession NumberAKJW00000000.1
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative threonine efflux protein | PMI16_01476 | Not Available | - | 1694976 - 1695614 | 22972.5 |
| acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase | PMI16_01477 | P0C155 | + | 1695778 - 1697199 | 52282.0 |
| oligopeptide/dipeptide abc transporter, atp-binding protein | PMI16_01478 | Not Available | - | 1697261 - 1698316 | 38685.1 |
| oligopeptide/dipeptide abc transporter, atp-binding protein | PMI16_01479 | P76027 | - | 1698313 - 1699296 | 35235.8 |
| abc-type dipeptide/oligopeptide/nickel transport system, permease component | PMI16_01480 | Not Available | - | 1699299 - 1700210 | 32962.3 |
| abc-type dipeptide/oligopeptide/nickel transport system, permease component | PMI16_01481 | Not Available | - | 1700212 - 1701189 | 35567.2 |
| amidohydrolase | PMI16_01482 | Not Available | + | 1701478 - 1702671 | 43329.6 |
| hypothetical protein | PMI16_01483 | Not Available | - | 1702765 - 1703229 | 17635.8 |
| putative membrane protein | PMI16_01484 | Not Available | + | 1703465 - 1703818 | 12407.7 |
| protein of unknown function (duf3047) | PMI16_01485 | Not Available | - | 1703823 - 1704671 | 31343.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.