Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum sp. CF444
Accession NumberAKJW00000000.1
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI16_01256 | Not Available | + | 1451372 - 1451935 | 21245.2 |
| amidase, asp-trnaasn/glu-trnagln amidotransferase a subunit | PMI16_01257 | Q72L58 | + | 1451938 - 1453110 | 40037.1 |
| ring-hydroxylating dioxygenase, large terminal subunit | PMI16_01258 | O85673 | + | 1453145 - 1454431 | 48493.4 |
| small subunit of phenylpropionate dioxygenase | PMI16_01259 | Not Available | + | 1454433 - 1454933 | 18502.0 |
| flavodoxin reductase family protein | PMI16_01260 | P12580 | + | 1454983 - 1455939 | 33437.9 |
| 4-hydroxyphenylacetate 3-monooxygenase, reductase component | PMI16_01261 | Q9HWT6 | - | 1456012 - 1456551 | 19621.6 |
| response regulator | PMI16_01262 | A5W4E2 | + | 1456951 - 1457583 | 23381.2 |
| transcriptional regulator | PMI16_01263 | Not Available | - | 1457679 - 1458431 | 27856.7 |
| rnd family efflux transporter, mfp subunit | PMI16_01264 | Not Available | + | 1458595 - 1459779 | 41771.6 |
| cation/multidrug efflux pump | PMI16_01265 | Q57124 | + | 1459776 - 1462928 | 114869.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.