Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum sp. CF444
Accession NumberAKJW00000000.1
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI16_01196 | Not Available | - | 1382794 - 1382907 | 4392.35 |
| cation/multidrug efflux pump | PMI16_01197 | P25197 | - | 1382894 - 1385995 | 110031.0 |
| rnd family efflux transporter, mfp subunit | PMI16_01198 | Not Available | - | 1385992 - 1387113 | 39063.9 |
| efflux transporter, outer membrane factor lipoprotein, nodt family | PMI16_01199 | P24145 | - | 1387110 - 1388480 | 48083.6 |
| signal transduction histidine kinase | PMI16_01200 | Not Available | + | 1388506 - 1390125 | 60218.7 |
| response regulator with chey-like receiver domain and winged-helix dna-binding domain | PMI16_01201 | P69229 | + | 1390122 - 1390802 | 25631.9 |
| transcriptional regulator with sigma factor-related n-terminal domain containing protein | PMI16_01202 | Q46087 | - | 1390954 - 1391250 | 11688.3 |
| hypothetical protein | PMI16_01203 | Not Available | - | 1391262 - 1392719 | 53572.6 |
| hypothetical protein | PMI16_01204 | Not Available | - | 1392883 - 1394334 | 53627.7 |
| single stranded dna-binding protein | PMI16_01205 | Q8Y2B4 | - | 1395210 - 1395716 | 17797.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.