Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum sp. CF444
Accession NumberAKJW00000000.1
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 1-aminocyclopropane-1-carboxylate deaminase | PMI16_01046 | A8GFZ8 | - | 1214081 - 1215106 | 36196.6 |
| transcriptional regulator | PMI16_01047 | Q8FDH0 | - | 1215203 - 1216117 | 33905.8 |
| 3-isopropylmalate dehydratase, large subunit | PMI16_01048 | Q8ZRJ0 | + | 1216236 - 1217651 | 49961.1 |
| 3-isopropylmalate dehydratase, small subunit | PMI16_01049 | Q7NW22 | + | 1217644 - 1218318 | 24760.6 |
| na+/citrate symporter | PMI16_01050 | O05256 | + | 1218391 - 1219713 | 46261.5 |
| pas domain s-box/diguanylate cyclase (ggdef) domain-containing protein | PMI16_01051 | Not Available | - | 1219752 - 1222337 | 97427.8 |
| pas domain s-box | PMI16_01052 | Q06067 | + | 1222563 - 1223858 | 48570.9 |
| response regulator containing a chey-like receiver domain and an hd-gyp domain | PMI16_01053 | Not Available | + | 1223914 - 1225263 | 50054.8 |
| response regulator containing a chey-like receiver domain and an hd-gyp domain | PMI16_01054 | P26408 | + | 1225281 - 1226099 | 30806.0 |
| hypothetical protein | PMI16_01055 | Not Available | + | 1226106 - 1226429 | 12023.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.